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Sequence Types sentence examples within multilocus sequence typing



Characterization of multidrug-resistant and virulent Klebsiella pneumoniae strains belonging to the high-risk clonal group 258 (CG258) isolated from inpatients in northeastern Brazil.


Extensively Drug-Resistant Hypervirulent Klebsiella pneumoniae From a Series of Neonatal Sepsis in a Tertiary Care Hospital, India

Sequence Types sentence examples within whole genome sequencing



Salmonella enterica subsp. diarizonae Harboring ST233, ST1263, and ST1845 in Children


Molecular detection and genotype characterization of Streptococcus dysgalactiae from sheep flocks with outbreaks of infectious arthritis.

Sequence Types sentence examples within multi locus sequence



Presence of plasmid-mediated quinolone resistance (PMQR) genes in non-typhoidal Salmonella strains with reduced susceptibility to fluoroquinolones isolated from human salmonellosis in Gyeonggi-do, South Korea from 2016 to 2019


Prevalence and molecular characterization of C. pecorum detected in Swiss fattening pigs.



Sequence Types sentence examples within pulsed field gel



Prevalence and Relatedness of mcr-1-Mediated Colistin-Resistant Escherichia coli Isolated From Livestock and Farmers in Japan


Epidemic Territorial Spread of IncP-2-Type VIM-2 Carbapenemase-Encoding Megaplasmids in Nosocomial Pseudomonas aeruginosa Populations

Sequence Types sentence examples within whole genome sequence



Detection of diverse carbapenem and multidrug resistance genes and high-risk strain types among carbapenem non-susceptible clinical isolates of target gram-negative bacteria in Kenya


Transmission of Klebsiella strains and plasmids within and between Grey-headed flying fox colonies

Sequence Types sentence examples within coli isolates belonged



Emergence of mobilized colistin resistance-1 in multidrug-resistant Klebsiella pneumoniae and Escherichia coli isolates from the Henan province in China: a multicentre study


Occurrence and Molecular Characteristics of Extended-Spectrum Beta-Lactamase-Producing Enterobacterales Recovered From Chicken, Chicken Meat, and Human Infections in Sao Paulo State, Brazil

Sequence Types sentence examples within different phylogroups suggesting



Whole-genome analysis of antimicrobial-resistant Escherichia coli in human gut microbiota reveals its origin and flexibility in transmitting mcr-1


Comparative Genomic Analysis of Extended-spectrum β-lactamase and mcr-1 Positive Escherichia coli from Gut Microbiota of Healthy Singaporeans.

Sequence Types sentence examples within performed whole genome



Draft genome sequences and resistome analysis of multidrug-resistant and mcr-1-harboring E. coli isolated from preharvest poultry in Lebanon.


Characterization of Shiga Toxin-Producing Escherichia coli Isolated From Cattle and Sheep in Xinjiang Province, China, Using Whole-Genome Sequencing.

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Surveillance of Listeria monocytogenes: Early detection, population dynamics and quasimetagenomic sequencing during selective enrichment.


Distribution and genomic characterization of tigecycline-resistant tet(X4)-positive Escherichia coli of swine farm origin.

Sequence Types sentence examples within Multilocu Sequence Types



Population structure and genetic diversity of non-O157 Shiga toxin-producing Escherichia coli (STEC) clinical isolates from Michigan


Epidemiological typing of methicillin resistant Staphylococcus aureus recovered from patients attending a maternity hospital in Ireland 2014–2019

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Significant Variability exists in the Toxicity of Global Methicillin-resistant Staphylococcus aureus Lineages


The Cytopathic Effect of Different Toxin Concentrations From Different Clostridioides difficile Sequence Types Strains in Vero Cells

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Preponderance of blaKPC-Carrying Carbapenem-Resistant Enterobacterales Among Fecal Isolates From Community Food Handlers in Kuwait


The Role of Whole Genome Sequencing in the Surveillance of Antimicrobial Resistant Enterococcus spp.: A Scoping Review

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Klebsiella pneumoniae ST11 Producing GES-5 Carbapenemase Isolated from Tertiary-Care Hospital.


Emergence of mobilized colistin resistance-1 in multidrug-resistant Klebsiella pneumoniae and Escherichia coli isolates from the Henan province in China: a multicentre study

Sequence Types sentence examples within Multiple Sequence Types



Heterogeneity of Staphylococcus epidermidis in prosthetic joint infections: Time to reevaluate microbiological criteria?


Third Generation Cephalosporin Resistant Enterobacterales Infections in Hospitalized Horses and Donkeys: A Case–Case–Control Analysis

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Vancomycin-resistant Enterococcus faecium in Algeria: phenotypic and genotypic characterization of clinical isolates.


Antimicrobial Resistance Glides in the Sky—Free-Living Birds as a Reservoir of Resistant Escherichia coli With Zoonotic Potential

Sequence Types sentence examples within Five Sequence Types



The Changing Landscape of Molecular Epidemiology of Staphylococcus Aureus Infections in Children.


Clonality, virulence genes, and antibiotic resistance of Staphylococcus aureus isolated from blood in Shandong, China

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Genomic Analysis of Enterococcus spp. Isolated From a Wastewater Treatment Plant and Its Associated Waters in Umgungundlovu District, South Africa


Molecular epidemiology of blaCTX-M gene-producing uropathogenic Escherichia coli among Iranian kidney transplant patients: clonal dissemination of CC131 and CC10

Sequence Types sentence examples within Coli Sequence Types



Genome characterization of ESBL-producing multidrug-resistant Escherichia coli in Rabat, Morocco.


Successful Dissemination of Plasmid-Mediated Extended-Spectrum β-Lactamases in Enterobacterales over Humans to Wild Fauna

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Whole Genome Sequencing of Pediatric Klebsiella pneumoniae Strains Reveals Important Insights Into Their Virulence-Associated Traits


Analysis of Virulence and Antimicrobial Resistance Gene Carriage in Staphylococcus aureus Infections in Equids Using Whole-Genome Sequencing

Sequence Types sentence examples within Major Sequence Types



Phylogenetic context of Shiga toxin-producing Escherichia coli serotype O26:H11 in England.


Clonal diversity of Acinetobacter baumannii clinical isolates in Myanmar: identification of novel ST1407 harbouring blaNDM-1

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Phenotypic and Genotypic Properties of Fluoroquinolone-Resistant, qnr-Carrying Escherichia coli Isolated from the German Food Chain in 2017


Characterization of Extended-Spectrum β-Lactamase-Producing and AmpC β-Lactamase-Producing Enterobacterales Isolated from Companion Animals in Korea

Sequence Types sentence examples within 10 Sequence Types



Application of Whole Genome Sequencing to Understand Diversity and Presence of Genes Associated with Sanitizer Tolerance in Listeria monocytogenes from Produce Handling Sources


Genetic diversity of Fusarium endophytes strains from sorghum (Sorghum bicolor L.) tissues in Burkina Faso

Sequence Types sentence examples within Mlst Sequence Types



P139 A Phylogenomic Survey of Disseminated Gonococcal Infection Isolates in the United States (2019–2020)


Virulence factors and molecular characteristics of Shigella flexneri isolated from calves with diarrhea

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Phenotypic and genetic characteristics of Streptococcus mutans isolates from site-specific dental plaque in China.


Phylogeny and Strain Typing of Wolbachia from Yamatotettix flavovittatus Matsumura Leafhoppers.

Sequence Types sentence examples within Prevalent Sequence Types



Active Surveillance, Drug Resistance, and Genotypic Profiling of Staphylococcus aureus Among School-Age Children in China


Drug susceptibility and molecular epidemiology of Escherichia coli in bloodstream infections in Shanxi, China

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Genomic analysis of group B Streptococcus from milk demonstrates the need for improved biosecurity: a cross-sectional study of pastoralist camels in Kenya


Transmission dynamics of a linear vanA-plasmid during a nosocomial multiclonal outbreak of vancomycin-resistant enterococci in a non-endemic area, Japan

Sequence Types sentence examples within Common Sequence Types



Dynamic changes in otopathogens colonizing the nasopharynx and causing acute otitis media in children after 13-valent (PCV13) pneumococcal conjugate vaccination during 2015-2019.


Molecular characterization of clinical carbapenem-resistant Enterobacterales from Qatar

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Genetically related Clostridium difficile from water sources and human CDI cases revealed by whole-genome sequencing.


Molecular Characteristics of Carbapenem-Resistant Klebsiella pneumoniae Isolates Producing blaVIM, blaNDM, and blaIMP in Clinical Centers in Isfahan, Iran

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Whole-genome analysis of antimicrobial-resistant Escherichia coli in human gut microbiota reveals its origin and flexibility in transmitting mcr-1


Comparative Genomic Analysis of Extended-spectrum β-lactamase and mcr-1 Positive Escherichia coli from Gut Microbiota of Healthy Singaporeans.

Sequence Types sentence examples within Dominant Sequence Types



Similar Antimicrobial Resistance of Escherichia coli Strains Isolated from Retail Chickens and Poultry Farms.


Investigation of tigecycline resistant Escherichia coli from raw meat reveals potential transmission among food-producing animals

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Prevalence and Characteristics of Phenicol-Oxazolidinone Resistance Genes in Enterococcus faecalis and Enterococcus faecium Isolated from Food-Producing Animals and Meat in Korea


Development and Application of a gp60-Based Subtyping Tool for Cryptosporidium bovis

Sequence Types sentence examples within Ten Sequence Types



Phylogeny of Mycoplasma bovis isolates from cattle and bison based on multi locus sequence typing and multiple-locus variable-number tandem repeats.


Species of Dickeya and Pectobacterium Isolated during an Outbreak of Blackleg and Soft Rot of Potato in Northeastern and North Central United States

Sequence Types sentence examples within 20 Sequence Types



Prevalence, antibiotic susceptibility and genetic diversity of Campylobacter jejuni isolated from retail food in China


Gene-gene relationships in an Escherichia coli accessory genome are linked to function and mobility.

Sequence Types sentence examples within Main Sequence Types



Novel Sequence Types of Listeria monocytogenes of Different Origin Obtained in the Republic of Serbia


Comparative genomics of ST5 and ST30 methicillin-resistant Staphylococcus aureus sequential isolates recovered from paediatric patients with cystic fibrosis

Sequence Types sentence examples within Gene Sequence Types



Treponema pallidum Macrolide Resistance and Molecular Epidemiology in Southern Africa, 2008 to 2018


Development of a real-time PCR method for rapid diagnosis of canine babesiosis and anaplasmosis

Sequence Types sentence examples within Frequent Sequence Types



Presence of plasmid-mediated quinolone resistance (PMQR) genes in non-typhoidal Salmonella strains with reduced susceptibility to fluoroquinolones isolated from human salmonellosis in Gyeonggi-do, South Korea from 2016 to 2019


Molecular epidemiology of carbapenem-resistant Acinetobacter baumannii strains in Belgian acute-care hospitals

Sequence Types sentence examples within Predominant Sequence Types



Genotypic and phenotypic characteristics of Streptococcus pneumoniae from community-acquired pneumonia patients and healthy asymptomatic participants in Sichuan province, China


Genotypic Characterization of Antimicrobial Resistant Salmonella spp. Strains from Three Poultry Processing Plants in Colombia

Sequence Types sentence examples within Nine Sequence Types



Occurrence and Molecular Characteristics of Extended-Spectrum Beta-Lactamase-Producing Enterobacterales Recovered From Chicken, Chicken Meat, and Human Infections in Sao Paulo State, Brazil


Genome Typing and Epidemiology of Human Listeriosis in New Zealand, 1999 to 2018

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Occurrence, antimicrobial resistance and whole genome sequence analysis of Salmonella serovars from pig farms in Ilorin, North-central Nigeria.


Genetic Characterisation of Colistin Resistant Klebsiella pneumoniae Clinical Isolates From North India

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Whole-Genome Sequencing of Brachyspira hyodysenteriae Isolates From England and Wales Reveals Similarities to European Isolates and Mutations Associated With Reduced Sensitivity to Antimicrobials


In silico analyses of penicillin binding proteins in Burkholderia pseudomallei uncovers SNPs with utility for phylogeography, species differentiation, and sequence typing

Sequence Types sentence examples within Certain Sequence Types



Insights into the acquisition of the pks island and production of colibactin in the Escherichia coli population


Insights into the acquisition of the pks island and production of colibactin in the Escherichia coli population

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Characteristics of Quinolone Resistance in Multidrug-Resistant Acinetobacter baumannii Strains Isolated from General Hospitals


A Test for the Rapid Detection of the Cefazolin Inoculum Effect in Methicillin-Susceptible Staphylococcus aureus

Sequence Types sentence examples within Seven Sequence Types



Aminoglycoside Resistance and Possible Mechanisms in Campylobacter Spp. Isolated From Chicken and Swine in Jiangsu, China


Comammox Nitrospira Species Dominate in an Efficient Partial Nitrification-Anammox Bioreactor for Treating Ammonium at Low Loadings.

Sequence Types sentence examples within Twelve Sequence Types



Whole genome sequence based capsular typing and antimicrobial resistance prediction of Group B streptococcal isolates from colonized pregnant women in Nigeria


Whole Genome Sequence based Capsular Typing and Antimicrobial Resistance Prediction of Group B Streptococcal Isolates from Colonized Pregnant Women in Nigeria

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Precise Species Identification by Whole-Genome Sequencing of Enterobacter Bloodstream Infection, China


Concurrent Resistance to Carbapenem and Colistin Among Enterobacteriaceae Recovered From Human and Animal Sources in Nigeria Is Associated With Multiple Genetic Mechanisms

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Deep Learning-based Type Identification of Volumetric MRI Sequences


Detection of Genetic Variability in Borrelia miyamotoi (Spirochaetales: Spirochaetaceae) Between and Within the Eastern and Western United States.

Sequence Types sentence examples within 33 Sequence Types



Clinical and molecular characteristics of Staphylococcus aureus isolated from Chinese children: association among the agr groups and genotypes, virulence genes and disease types


MLST/MVLST Analysis and Antibiotic Resistance of Vibrio cholerae in Shandong Province of China

Sequence Types sentence examples within Seventeen Sequence Types



Identification of Methicillin-Resistant Staphylococcus Aureus From Methicillin-Sensitive Staphylococcus Aureus and Molecular Characterization in Quanzhou, China


Spread of Linezolid-Resistant Enterococcus spp. in Human Clinical Isolates in the Czech Republic

Sequence Types sentence examples within 300 Sequence Types



Gastrointestinal carriage of Klebsiella pneumoniae in a general adult population in Norway: a cross-sectional study of risk factors and bacterial genomic diversity


Gastrointestinal carriage of Klebsiella pneumoniae in a general adult population: a cross-sectional study of risk factors and bacterial genomic diversity

Sequence Types sentence examples within 55 Sequence Types



Comparative Study of the Genetic Diversity, Antimicrobial Resistance, and Pathogenicity of Aeromonas Isolates from Clinical Patients and Healthy Individuals.


Global population structure of Haemophilus influenzae serotype a (Hia) and emergence of invasive Hia disease: capsule switching or capsule replacement?

Sequence Types 序列类型


Sequence Types 序列类型
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