トランスクリプトの豊富さとは何ですか？
Transcript Abundances トランスクリプトの豊富さ - Metabolite and transcript abundances for the upregulation of flavone and flavonol biosynthesis under prolonged heat stress were closely correlated. [1] The transcript abundances of known anion transporters were determined and a family of putative B transporters was associated with the Cl- exclusion phenotype. [2] Clinical parameters between patient groups were compared, and several bioinformatic tools were used to assess differences in transcript abundances and cellular composition. [3] In future acidified oceanic conditions, dramatic oscillation with >10-fold change between nighttime (high) and daytime (low) transcript abundances of the antiporter was associated with increased resilience of T. [4] Real-time polymerase chain reaction and Western blotting were performed to determine the transcript abundances and protein expressions of TRIM66, HP1γ, AR, c-Myc, and GAPDH. [5] In the CuNP treatment, on the other hand, the transcript abundances of cell junction compositions, except adherens junction, were upregulated. [6] To understand how glial cells promoted neuronal maturation, we studied the association of transcript abundances in glial cells to gene expression in neurons. [7] However, long protein half-lives dampen this oscillation of transcript abundances, and putative functions remain elusive. [8] Nitrogen fertilization rate had a stronger influence on diazotroph population size and activity (determined by nifH gene and transcript abundances) and community composition (determined by nifH gene amplicon sequencing) than agricultural season or grass species. [9] We performed whole transcriptome sequencing and assessed sexually dimorphic changes in transcript abundances (transcriptional niches) associated with each gene-edited genotype. [10] However, transcript abundances (TA) in these cell mixture samples are confounded by proportions of the component leukocyte subpopulations. [11] The exceptions are the LOV-domain transcription factors with peaks in transcript abundances at different times and putative phototaxis photoreceptors transcribed throughout the day. [12] The transcript abundances of genes that regulate OsABI5, e. [13] The completeness of the resulting environmental eukaryotic taxonomic bins was assessed, and 48 genera were further evaluated for diel patterns in transcript abundances. [14] Changes in transcript abundances in the RNase P mutant also correlated with changes in their half-lives. [15] 0), was used to quantify gene and transcript abundances from 22 RNA-seq experiments, covering 843 separate samples. [16] RNA extracted from representative strains of each serovar grown to late exponential phase in Luria-Bertani (LB) broth showed that transcript abundances of core genes were significantly higher (p<0. [17] RA and RAn were positively correlated with transcript abundances of amoA and hzsB genes, respectively, rather than gene abundances. [18] Analysis of transcript abundances in excised inflorescences during an extended night suggested an intricate relationship among sugar starvation, senescence and SL biosynthesis and signalling. [19] Determination of the transcript abundances of lignocellulolytic enzyme genes reveals significant upregulation of multiple α-l-arabinofuranosidase genes and downregulation of some cellulolytic and xylanolytic enzyme genes in the engineered strain relative to its parent. [20] Moveover, salt and drought stresses can regulate the transcript abundances of BnaPHT1s, as well as phytohormones including auxin and cytokinin. [21] qPCR analysis indicated that transcript abundances of DkZF1/4 were significantly upregulated during AHCA treatment (1% O2 and 95% CO2) at day 1, DkZF2/5 at both day 1 and 2, while DkZF3 at day 2. [22] In addition, drought-responsive cis-elements were observed in peach NF-Y promoters, and 9 peach NF-Y genes were shown to distinctly increase their transcript abundances under drought stress. [23] To explore the expression patterns of CsPAP genes in response to excessive Fe supply, RNA-sequencing (RNA-seq) analyses were performed to compare their transcript abundances between tea plants that are grown under normal and high iron conditions, respectively. [24] Furthermore, transcript abundances of the alcoholic fermentation-related genes ADH1-1, ADH1-2, ADH1-3, PDC1, and PDC2 were reduced in PhERF2-silenced plants, but increased in PhERF2-overexpressing plants following exposure to 12-h waterlogging. [25] MnEIL3 overexpression in Arabidopsis significantly upregulated the transcript abundances of ethylene biosynthetic genes. [26] While no differences were detected for transcript abundances of the assessed ovarian HSP, the protein abundance of specific HSP was influenced by stressors during the follicular and luteal phases. [27] Transcript abundances are estimated from equivalence classes (ECs), which determine the transcripts that any given read is compatible with. [28] The transcript abundances of nine highly abundant candidate transcripts, as well as of two additional genes previously known to be involved in reproduction, cyp19 (p450 aromatase) and foxl2, were assessed in the individual samples by qRT-PCR. [29] Here we found that total carotenoid content continued to be elevated along the course of banana ripening and peaked at the ripening stage followed by a decrease, which is presumably caused by the transcript abundances of carotenoid biosynthetic genes MaLCYB1. [30] Upon TDIF treatment, the DR5:GUS poplar leaves revealed a higher GUS activity and in TDIF-overexpressing leaves, the transcript abundances of several PIN genes, especially that of PIN1, were increased, which implied an integration of TDIF and auxin in mediating this process. [31] Two candidate elicitors (designated as tetranin1 (Tet1) and tetranin2 (Tet2)) triggered early leaf responses (cytosolic calcium influx and membrane depolarization) and increased the transcript abundances of defense genes in the leaves, eventually resulting in reduced survivability of T. [32] Current expression quantification methods suffer from a fundamental but under-characterized type of error: the most likely estimates for transcript abundances are not unique. [33] The expression profile analysis indicated that BrCB5s were differentially expressed in different tissues, and the transcript abundances were significantly different under various abiotic stresses and plant hormone treatments. [34] Transcript abundances for cellular lineage markers (KRT18 and VIM), oestrogen receptor (ESR1), interferon α/beta receptor 1 (IFNAR1), and prostaglandin G/H synthase 1 (PTGS1) and 2 (PTGS2) were evaluated by real-time quantitative PCR. [35] The described approach, named AAV-bcTuD screening, offers a new alternative for in vivo assessment of rAAV that can accurately quantify vector genomes and transcript abundances in tissues, as exampled by the demonstration in liver and brain infections. [36] Results of the reverse transcription-polymerase chain reaction (RT-PCR) showed that transcript abundances of nitrate reductase (narG), nitrite reductase (nirS), and perchlorate reductase (pcrA) increased when the perchlorate and nitrate concentrations were higher. [37] The transcript abundances of these corresponding genes were analyzed by qRT-PCR. [38] Transcript abundances of genes encoding 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 (PFKFB4), lactate dehydrogenase-A (LDHA), and phosphorylase kinase beta subunit (PHKB) were increased in heavy-WS but decreased in heavy-WS+WB. [39] Transcript abundances were analyzed by group means parameterization, controlling the false discovery rate below 0. [40] Finally, we detected a negative relationship between changes in transcript abundances in response to the solvent and phenanthrene. [41] High levels of transcript abundances were not confined to genes associated with the distinct walls of grasses but also of those associated with xyloglucan and pectin synthesis. [42] We also investigated the relative expression levels of six genes related to K+ and Na+ transport in roots of diploid and tetraploid by qRT-PCR method, and found that BvHKT1;1, BvNHX1, BvSKOR, and BvSOS1 were induced by additional 50 mM NaCl, and their transcript abundances in tetraploid were relatively higher than those in diploid. [43] Transcript abundances are estimated from equivalence classes (ECs), which determine the transcripts that any given read is compatible with. [44] In the ovary, transcript abundances of fshr and lhr gradually increased during previtellogenic follicle growth, but markedly and significantly increased thereafter. [45] While genetic effects on transcript abundances were generally transmitted to the protein level, we found a significant uncoupling of the transcript-protein relationship for certain protein classes, such as subunits of protein complexes. [46]長期の熱ストレス下でのフラボンとフラボノール生合成のアップレギュレーションの代謝物と転写産物の存在量は密接に相関していた。 [1] 既知の陰イオントランスポーターの転写産物量が決定され、推定BトランスポーターのファミリーがCl-排除表現型と関連していた。 [2] 患者グループ間の臨床パラメーターを比較し、いくつかのバイオインフォマティクスツールを使用して、転写産物の量と細胞組成の違いを評価しました。 [3] 将来の酸性化した海洋条件では、アンチポーターの夜間（高）と日中（低）の転写産物量の間に10倍を超える変化を伴う劇的な振動が、Tの回復力の増加と関連していました。 [4] リアルタイムポリメラーゼ連鎖反応とウエスタンブロッティングを実施して、TRIM66、HP1γ、AR、c-Myc、およびGAPDHの転写産物量とタンパク質発現を測定しました。 [5] 一方、CuNP処理では、接着結合を除く細胞結合組成の転写産物量がアップレギュレーションされました。 [6] グリア細胞がニューロンの成熟をどのように促進したかを理解するために、グリア細胞の転写産物量とニューロンの遺伝子発現との関連を研究しました。 [7] ただし、タンパク質の半減期が長いと、転写産物の量のこの変動が抑制され、推定機能はとらえどころのないままです。 [8] 窒素施肥率は、農業シーズンや草種よりも、窒素固定菌の個体数と活動（nifH遺伝子と転写産物の存在量によって決定される）および群集構成（nifH遺伝子アンプリコンシーケンスによって決定される）に強い影響を及ぼしました。 [9] 全トランスクリプトームシーケンシングを実行し、各遺伝子編集遺伝子型に関連する転写産物量（転写ニッチ）の性的二形性変化を評価しました。 [10] ただし、これらの細胞混合物サンプルの転写産物量（TA）は、構成要素である白血球亜集団の比率によって混乱します。 [11] 例外は、さまざまな時間に転写産物の量にピークがあるLOVドメイン転写因子と、1日を通して転写される推定走光性光受容体です。 [12] OsABI5を調節する遺伝子の転写産物量、e。 [13] 得られた環境真核生物の分類学的ビンの完全性を評価し、48属をさらに転写産物量の日周パターンについて評価しました。 [14] RNase P変異体の転写産物量の変化も、半減期の変化と相関していました。 [15] 0）、843の別々のサンプルをカバーする22のRNA-seq実験からの遺伝子と転写産物の存在量を定量化するために使用されました。 [16] Luria-Bertani（LB）ブロスで指数増殖期後期まで増殖した各血清型の代表的な株から抽出されたRNAは、コア遺伝子の転写産物量が有意に高いことを示しました（p <0）。 [17] RAとRAnは、遺伝子量ではなく、それぞれamoA遺伝子とhzsB遺伝子の転写産物量と正の相関がありました