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Oocyte vitrification induces loss of DNA methylation and histone acetylation in the resulting embryos derived using ICSI in dromedary camel.



Responsiveness of Aromatoleum aromaticum EbN1T to Lignin-Derived Phenylpropanoids


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Lymphocyte soluble factors from pregnant cows modulate mRNA transcript abundances encoding for proteins associated with trophoblast growth and development.



Analysis across diverse fish species highlights no conserved transcriptome signature for proactive behaviour


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Enzymes degraded under high light maintain proteostasis by transcriptional regulation in Arabidopsis



TaNAC032 transcription factor regulates lignin-biosynthetic genes to combat Fusarium head blight in wheat.




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Soil Health Management Enhances Microbial Nitrogen Cycling Capacity and Activity



Molecular Evidence for Precursors of Sjögren’s Foci in Histologically Normal Lacrimal Glands


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Transcriptome characterization and expression profile of Coix lacryma-jobi L. in response to drought



A junction coverage compatibility score to quantify the reliability of transcript abundance estimates and annotation catalogs


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A tomato dynein light chain gene SlLC6D is a negative regulator of chilling stress.



Identification and fine mapping of qGR6.2, a novel locus controlling rice seed germination under salt stress


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Mitochondrial DNA Depletion in Granulosa Cell Derived Nuclear Transfer Tissues



Transcriptome Responses of Ripe Cherry Tomato Fruit Exposed to Chilling and Rewarming Identify Reversible and Irreversible Gene Expression Changes



Gene and Metabolite Integration Analysis through Transcriptome and Metabolome Brings New Insight into Heat Stress Tolerance in Potato (Solanum tuberosum L.)


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10.1016/j.plantsci.2020.110753

A tomato dynein light chain gene SlLC6D is a negative regulator of chilling stress.



Oocyte vitrification induces loss of DNA methylation and histone acetylation in the resulting embryos derived using ICSI in dromedary camel.



Identification and fine mapping of qGR6.2, a novel locus controlling rice seed germination under salt stress


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10.20870/oeno-one.2021.55.4.4795

Is foliar Cl- concentration the cause of photosynthetic decline in grapevine during mild salinity?


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10.1101/2021.05.12.21257086

Distinct immune responses in patients infected with influenza or SARS-CoV-2, and in COVID-19 survivors, characterised by transcriptomic and cellular abundance differences in blood.


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10.1016/j.anireprosci.2021.106747

Lymphocyte soluble factors from pregnant cows modulate mRNA transcript abundances encoding for proteins associated with trophoblast growth and development.



Diel Transcriptional Oscillations of a Plastid Antiporter Reflect Increased Resilience of Thalassiosira pseudonana in Elevated CO2



Qi Ling Inhibits Progression of Androgen-Independent Prostate Cancer via Negative Regulation of TRIM66/HP1γ/AR Axis.



Enzymes degraded under high light maintain proteostasis by transcriptional regulation in Arabidopsis


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10.1016/j.ecoenv.2020.111716

Identification of molecular toxicity pathways across early life-stages of zebrafish exposed to PCB126 using a whole transcriptomics approach.


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10.1016/j.ecoenv.2021.112876

Effect of copper nanoparticles and copper ions on the architecture of rainbow trout olfactory mucosa.



Astrocytic cell adhesion genes linked to schizophrenia promote synaptic programs in neurons



Analysis across diverse fish species highlights no conserved transcriptome signature for proactive behaviour


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10.1007/978-1-0716-1307-8_6

Using RNentropy to Detect Significant Variation in Gene Expression Across Multiple RNA-Seq or Single-Cell RNA-Seq Samples.



Spatio-temporal Coordination of Transcription During the Cell Growth Cycle in Budding Yeast



Nitrogen Fertilization and Native C4 Grass Species Alter Abundance, Activity, and Diversity of Soil Diazotrophic Communities



Transcriptional dynamics of methane-cycling microbiomes are linked to seasonal CH4 fluxes in two hydromorphic and organic-rich grassland soils



Linking meta-omics to the kinetics of denitrification intermediates reveals pH-dependent causes of N2O emissions and nitrite accumulation in soil.



Soil Health Management Enhances Microbial Nitrogen Cycling Capacity and Activity



Abscisic Acid Metabolism in Leaves and Roots of Four Vitis Species in Response to Water Deficit



Functional Diversification, Redundancy, and Epistasis among Paralogs of the Drosophila melanogaster Obp50a–d Gene Cluster



Transcriptomic and isotopic data reveal central role of ammonium in facilitating the growth of the mixotrophic dinoflagellate, Dinophysis acuminata.



Sweet spheres: Succession and CAZyme expression of marine bacterial communities colonising a mix of alginate and pectin particles.



Direct Measurement of B Lymphocyte Gene Expression Biomarkers in Peripheral Blood Transcriptomics Enables Early Prediction of Vaccine Seroconversion


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10.1371/journal.pone.0250715

RNAseq and RNA molecular barcoding reveal differential gene expression in cortical bone following hindlimb unloading in female mice


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10.1016/j.plantsci.2021.110820

TaNAC032 transcription factor regulates lignin-biosynthetic genes to combat Fusarium head blight in wheat.


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10.1016/J.SCIENTA.2021.110368

Cloning and functional characterization of two carotenoid cleavage dioxygenases for ionone biosynthesis in chili pepper (Capsicum annuum L.) fruits


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10.1016/j.ecoenv.2021.112697

The effects of TPT and dietary quercetin on growth, hepatic oxidative damage and apoptosis in zebrafish.



Diel transcriptional oscillations of light-sensitive regulatory elements in open-ocean eukaryotic plankton communities



Responsiveness of Aromatoleum aromaticum EbN1T to Lignin-Derived Phenylpropanoids



The Majority of Typhoid Toxin-Positive Salmonella Serovars Encode ArtB, an Alternate Binding Subunit



Expression analysis of genes related to cold tolerance in Dendroctonus valens


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10.1016/j.anireprosci.2021.106823

Transcriptomic analysis of ovarian signaling at the emergence of the embryo from obligate diapause in the American mink (Neovison vison).



Cis-regulatory divergence underpins the evolution of C3-C4 intermediate photosynthesis in Moricandia



OsKEAP1 Interacts with OsABI5 and Its Downregulation Increases the Transcription of OsABI5 and the ABA Response Genes in Germinating Rice Seeds



Diel-Regulated Transcriptional Cascades of Microbial Eukaryotes in the North Pacific Subtropical Gyre



Inactivation of RNase P in Escherichia coli significantly changes post-transcriptional RNA metabolism.



EORNA, a barley gene and transcript abundance database



Characterization of Basal Transcriptomes Identifies Potential Metabolic and Virulence-Associated Adaptations Among Diverse Nontyphoidal Salmonella enterica Serovars


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10.1371/journal.pone.0256875

Transcriptome characterization and expression profile of Coix lacryma-jobi L. in response to drought



Spatial distribution and co-occurrence of aerobic ammonia oxidation and anaerobic ammonium oxidation activities in the water-soil interface, bulk, and rhizosphere regions of paddy soil



Mitochondrial DNA Depletion in Granulosa Cell Derived Nuclear Transfer Tissues



Transcriptome Responses of Ripe Cherry Tomato Fruit Exposed to Chilling and Rewarming Identify Reversible and Irreversible Gene Expression Changes



Strigolactones regulate sepal senescence in Arabidopsis.



Placental expression of miR-21-5p, miR-210-3p and miR-141-3p: relation to human fetoplacental growth



Denitrification Biokinetics: Towards Optimization for Industrial Applications



Cooccurring Activities of Two Autotrophic Pathways in Symbionts of the Hydrothermal Vent Tubeworm Riftia pachyptila



Mutation of a Conserved Alanine Residue in Transcription Factor AraR Leads to Hyperproduction of α-l-Arabinofuranosidases in Penicillium oxalicum.



The third pillar of metal homeostasis in Cupriavidus metallidurans CH34: preferences are controlled by extracytoplasmic function sigma factors.


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10.1371/journal.pone.0220374

Molecular identification of the phosphate transporter family 1 (PHT1) genes and their expression profiles in response to phosphorus deprivation and other abiotic stresses in Brassica napus



C2H2-Type Zinc Finger Proteins (DkZF1/2) Synergistically Control Persimmon Fruit Deastringency



Transcriptomic responses of the marine cyanobacterium Prochlorococcus to viral lysis products.



Use of the high‐affinity phosphate transporter gene, pstS, as an indicator for phosphorus stress in the marine diazotroph Crocosphaera watsonii (Chroococcales, Cyanobacteria)



Genome-wide analysis of the NF-Y gene family in peach (Prunus persica L.)



Keystone genes of mammalian tooth patterning and quantification of their expression



Identification of Tea Plant Purple Acid Phosphatase Genes and Their Expression Responses to Excess Iron



PhERF2, an ethylene-responsive element binding factor, plays an essential role in waterlogging tolerance of petunia



Mulberry EIL3 confers salt and drought tolerances and modulates ethylene biosynthetic gene expression



Differentiating between the effects of heat stress and lipopolysaccharide on the porcine ovarian heat shock protein response1.



Manipulation of Carotenoid Metabolic Flux by Lycopene Cyclization in Ripening Red Pepper ( Capsicum annuum var. conoides) Fruits.



Single cell and single molecule resolution of herpesvirus genome transport, condensation state and transcriptional output



Deep transcriptome sequencing of subgenual anterior cingulate cortex reveals disorder-specific expression changes in major psychiatric disorders


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10.12688/f1000research.18276.1

Fast and accurate differential transcript usage by testing equivalence class counts.


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10.1016/j.anireprosci.2018.11.013

Sex-related gonadal gene expression differences in the Russian sturgeon (Acipenser gueldenstaedtii) grown in stable aquaculture conditions.



Banana MaSPL16 Modulates Carotenoid Biosynthesis during Fruit Ripening Through Activating the Transcription of Lycopene β-Cyclase Genes.



TDIF overexpression in poplars retards internodal elongation and enhances leaf venation through interacting with other phytohormones.


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10.1007/978-1-4939-9007-8_11

Bioinformatics Analysis of Single-Cell RNA-Seq Raw Data from iPSC-Derived Neural Stem Cells.



Tetranins: new putative spider mite elicitors of host plant defense.



Deep learning of representations for transcriptomics-based phenotype prediction



Finding ranges of optimal transcript expression quantification in cases of non-identifiability



Cold Acclimation of the Thermoacidophilic Red Alga Galdieria sulphuraria: Changes in Gene Expression and Involvement of Horizontally Acquired Genes



Endometrial luminal epithelial cells sense embryo elongation in the roe deer independent of interferon-tau†



Genome-Wide Identification and Analysis of the Cytochrome B5 Protein Family in Chinese Cabbage (Brassica rapa L. ssp. Pekinensis)



65 Improvement of bovine early embryo development in vitro by coculture with endometrial epithelial cells



Molecular Evidence for Precursors of Sjögren’s Foci in Histologically Normal Lacrimal Glands



BOARD INVITED REVIEW: Post-transfer consequences of in vitro-produced embryos in cattle.



High-Throughput Quantification of In Vivo Adeno-Associated Virus Transduction with Barcoded Non-Coding RNAs.


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10.1016/j.watres.2019.115397

How nitrate affects perchlorate reduction in a methane-based biofilm batch reactor.



Sugar metabolic changes in protein expression associated with different light quality combinations in tomato fruit


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10.1371/journal.pone.0220904

Absolute expressions of hypoxia-inducible factor-1 alpha (HIF1A) transcript and the associated genes in chicken skeletal muscle with white striping and wooden breast myopathies



Increased flux in acetyl-CoA synthetic pathway and TCA cycle of Kluyveromyces marxianus under respiratory conditions



Productivity, reproductive performance, and fat deposition of laying duck breeders in response to concentrations of dietary energy and protein.



The ORMDL3 Asthma Gene Regulates ICAM1 and Has Multiple Effects on Cellular Inflammation



Transcriptome-level effects of the model organic pollutant phenanthrene and its solvent acetone in three amphipod species.



Isolation of a New PAK1 Gene from Sea Cucumber (Apostichopus japonicus) and Its Expression Analysis and Function Characterization


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